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Sanger DNA Sequencing Exam Questions and Answers Already Passed

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Sanger DNA Sequencing Exam Questions and Answers Already Passed DNA Sequencing - Answers the primary method for gne and protein characterization Sanger Sequencing AKA - Answers - Dideoxynucleotide sequencing - Chain termination sequencing (DNA synthesis will terminate with the incorporation o...

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  • October 21, 2024
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  • 2024/2025
  • Exam (elaborations)
  • Questions & answers
  • Sanger DNA Sequencing
  • Sanger DNA Sequencing
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TutorJosh
Sanger DNA Sequencing Exam Questions and Answers Already Passed

DNA Sequencing - Answers the primary method for gne and protein characterization

Sanger Sequencing AKA - Answers - Dideoxynucleotide sequencing


- Chain termination sequencing (DNA synthesis will terminate with the incorporation of a
dideoxynucleotide b/c no more 5'-3' synthesis possible)

Principle of Sanger Sequencing - Answers - All four dNTPs are used

- Four separate reactions are set up

- Each as a different ddNTP: ddATP, ddTTP, ddCTP, ddGTP

- Klenow will incorporate dNTPs until a ddNTP is incorporated which terminates synthesis

- DNA is denatured and the four smaples are loaded next to each other and DNA separted on a PAGE gel

- Separate based on size of fragment -> run on a high % page gel to separate very specifically (even
single base differences)

Steps of sanger sequencing - Answers 1. PCR clean up

(remove excess primer by exonucleas 1 and dNTP's by alkaine prophasphatase

2. Cycle sequencing

3. Purify the extension products: ethanol precipitation '

4. sequencing analaysis '

5. gel or capillaries

6. Analysis

A-T cloning - Answers -In a PCR-reaction most polymerases add A to the end of the product

-Vector has a T-overhang where the PCR-poduct is ligated.

-Following ligation, the vector with the PCR-product is transformed into competent E.coli cells by heat-
shock

-The E.coli is plated on to selective agar plates

-Pick colonies (clones) and culture

-Isolate plasmid-DNA

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